----------Julia and Package versions---------- Julia Version 0.7.0 Commit a4cb80f3ed (2018-08-08 06:46 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-6.0.0 (ORCJIT, haswell) Status `~/.julia/environments/v0.7/Project.toml` [12b1f071] FractionalGaussianFields v0.1.0 ----------STDOUT---------- Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] Get:2 http://cran.rstudio.com/bin/linux/ubuntu xenial/ InRelease [3590 B] Hit:3 http://ppa.launchpad.net/openjdk-r/ppa/ubuntu xenial InRelease Get:4 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [93.8 kB] Hit:5 http://archive.ubuntu.com/ubuntu xenial InRelease Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [709 kB] Get:7 http://cran.rstudio.com/bin/linux/ubuntu xenial/ Packages [134 kB] Get:8 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [481 kB] Get:9 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3744 B] Get:10 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] Get:11 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [280 kB] Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1097 kB] Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [889 kB] Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] Get:16 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8256 B] Fetched 4042 kB in 1s (3048 kB/s) Reading package lists... Cloning default registries into /home/jrun/FractionalGaussianFields/.julia/registries Cloning registry General from "https://github.com/JuliaRegistries/General.git" [?25l Fetching: [> ] 0.0 % [?25h Updating registry at `~/.julia/registries/General` Updating git-repo `https://github.com/JuliaRegistries/General.git` [?25l[?25h Resolving package versions... Installed WinRPM ─────────────────── v0.4.2 Installed BinaryProvider ─────────── v0.5.0 Installed FractionalGaussianFields ─ v0.1.0 Installed ColorTypes ─────────────── v0.7.5 Installed Cairo ──────────────────── v0.5.6 Installed SimpleTraits ───────────── v0.8.0 Installed LibCURL ────────────────── v0.4.1 Installed Colors ─────────────────── v0.9.4 Installed DataStructures ─────────── v0.14.0 Installed Homebrew ───────────────── v0.7.0 Installed OffsetArrays ───────────── v0.8.1 Installed Graphics ───────────────── v0.4.0 Installed BinDeps ────────────────── v0.8.10 Installed HTTPClient ─────────────── v0.2.1 Installed ArnoldiMethod ──────────── v0.0.4 Installed Requires ───────────────── v0.5.2 Installed AxisAlgorithms ─────────── v0.3.0 Installed AsyPlots ───────────────── v0.2.0 Installed Libz ───────────────────── v1.0.0 Installed Ratios ─────────────────── v0.3.0 Installed LightGraphs ────────────── v1.1.0 Installed Interpolations ─────────── v0.9.2 Installed StaticArrays ───────────── v0.8.3 Installed NaNMath ────────────────── v0.3.2 Installed FixedPointNumbers ──────── v0.5.3 Installed JSON ───────────────────── v0.19.0 Installed URIParser ──────────────── v0.4.0 Installed Media ──────────────────── v0.4.1 Installed Contour ────────────────── v0.5.1 Installed ProgressMeter ──────────── v0.6.0 Installed BufferedStreams ────────── v1.0.0 Installed WoodburyMatrices ───────── v0.4.1 Installed OrderedCollections ─────── v1.0.2 Installed MacroTools ─────────────── v0.4.4 Installed Compat ─────────────────── v1.2.0 Installed CodecZlib ──────────────── v0.5.0 Installed Hiccup ─────────────────── v0.2.2 Installed TranscodingStreams ─────── v0.8.1 Installed LibExpat ───────────────── v0.5.0 Installed Reexport ───────────────── v0.2.0 Updating `~/.julia/environments/v0.7/Project.toml` [12b1f071] + FractionalGaussianFields v0.1.0 Updating `~/.julia/environments/v0.7/Manifest.toml` [ec485272] + ArnoldiMethod v0.0.4 [77e5a97a] + AsyPlots v0.2.0 [13072b0f] + AxisAlgorithms v0.3.0 [9e28174c] + BinDeps v0.8.10 [b99e7846] + BinaryProvider v0.5.0 [e1450e63] + BufferedStreams v1.0.0 [159f3aea] + Cairo v0.5.6 [944b1d66] + CodecZlib v0.5.0 [3da002f7] + ColorTypes v0.7.5 [5ae59095] + Colors v0.9.4 [34da2185] + Compat v1.2.0 [d38c429a] + Contour v0.5.1 [864edb3b] + DataStructures v0.14.0 [53c48c17] + FixedPointNumbers v0.5.3 [12b1f071] + FractionalGaussianFields v0.1.0 [a2bd30eb] + Graphics v0.4.0 [0862f596] + HTTPClient v0.2.1 [9fb69e20] + Hiccup v0.2.2 [d9be37ee] + Homebrew v0.7.0 [a98d9a8b] + Interpolations v0.9.2 [682c06a0] + JSON v0.19.0 [b27032c2] + LibCURL v0.4.1 [522f3ed2] + LibExpat v0.5.0 [2ec943e9] + Libz v1.0.0 [093fc24a] + LightGraphs v1.1.0 [1914dd2f] + MacroTools v0.4.4 [e89f7d12] + Media v0.4.1 [77ba4419] + NaNMath v0.3.2 [6fe1bfb0] + OffsetArrays v0.8.1 [bac558e1] + OrderedCollections v1.0.2 [92933f4c] + ProgressMeter v0.6.0 [c84ed2f1] + Ratios v0.3.0 [189a3867] + Reexport v0.2.0 [ae029012] + Requires v0.5.2 [699a6c99] + SimpleTraits v0.8.0 [90137ffa] + StaticArrays v0.8.3 [3bb67fe8] + TranscodingStreams v0.8.1 [30578b45] + URIParser v0.4.0 [c17dfb99] + WinRPM v0.4.2 [efce3f68] + WoodburyMatrices v0.4.1 [2a0f44e3] + Base64 [ade2ca70] + Dates [8bb1440f] + DelimitedFiles [8ba89e20] + Distributed [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [44cfe95a] + Pkg [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays [10745b16] + Statistics [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode Building LibCURL ──→ `~/.julia/packages/LibCURL/OoXMv/deps/build.log` Building WinRPM ───→ `~/.julia/packages/WinRPM/Y9QdZ/deps/build.log` Building Homebrew ─→ `~/.julia/packages/Homebrew/l8kUw/deps/build.log` Building Cairo ────→ `~/.julia/packages/Cairo/CXPG1/deps/build.log` Building CodecZlib → `~/.julia/packages/CodecZlib/wwgbh/deps/build.log` asy not found, using Cairo backend asy not found, using Cairo backend Testing FractionalGaussianFields Status `/tmp/tmpIquGp1/Manifest.toml` [ec485272] ArnoldiMethod v0.0.4 [77e5a97a] AsyPlots v0.2.0 [13072b0f] AxisAlgorithms v0.3.0 [9e28174c] BinDeps v0.8.10 [b99e7846] BinaryProvider v0.5.0 [e1450e63] BufferedStreams v1.0.0 [159f3aea] Cairo v0.5.6 [944b1d66] CodecZlib v0.5.0 [3da002f7] ColorTypes v0.7.5 [5ae59095] Colors v0.9.4 [34da2185] Compat v1.2.0 [d38c429a] Contour v0.5.1 [864edb3b] DataStructures v0.14.0 [53c48c17] FixedPointNumbers v0.5.3 [12b1f071] FractionalGaussianFields v0.1.0 [a2bd30eb] Graphics v0.4.0 [0862f596] HTTPClient v0.2.1 [9fb69e20] Hiccup v0.2.2 [d9be37ee] Homebrew v0.7.0 [a98d9a8b] Interpolations v0.9.2 [682c06a0] JSON v0.19.0 [b27032c2] LibCURL v0.4.1 [522f3ed2] LibExpat v0.5.0 [2ec943e9] Libz v1.0.0 [093fc24a] LightGraphs v1.1.0 [1914dd2f] MacroTools v0.4.4 [e89f7d12] Media v0.4.1 [77ba4419] NaNMath v0.3.2 [6fe1bfb0] OffsetArrays v0.8.1 [bac558e1] OrderedCollections v1.0.2 [92933f4c] ProgressMeter v0.6.0 [c84ed2f1] Ratios v0.3.0 [189a3867] Reexport v0.2.0 [ae029012] Requires v0.5.2 [699a6c99] SimpleTraits v0.8.0 [90137ffa] StaticArrays v0.8.3 [3bb67fe8] TranscodingStreams v0.8.1 [30578b45] URIParser v0.4.0 [c17dfb99] WinRPM v0.4.2 [efce3f68] WoodburyMatrices v0.4.1 [2a0f44e3] Base64 [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Base64`] [ade2ca70] Dates [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Dates`] [8bb1440f] DelimitedFiles [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/DelimitedFiles`] [8ba89e20] Distributed [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Distributed`] [b77e0a4c] InteractiveUtils [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/InteractiveUtils`] [76f85450] LibGit2 [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/LibGit2`] [8f399da3] Libdl [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Libdl`] [37e2e46d] LinearAlgebra [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/LinearAlgebra`] [56ddb016] Logging [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Logging`] [d6f4376e] Markdown [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Markdown`] [a63ad114] Mmap [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Mmap`] [44cfe95a] Pkg [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Pkg`] [de0858da] Printf [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Printf`] [3fa0cd96] REPL [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/REPL`] [9a3f8284] Random [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Random`] [ea8e919c] SHA [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/SHA`] [9e88b42a] Serialization [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Serialization`] [1a1011a3] SharedArrays [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/SharedArrays`] [6462fe0b] Sockets [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Sockets`] [2f01184e] SparseArrays [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/SparseArrays`] [10745b16] Statistics [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Statistics`] [8dfed614] Test [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Test`] [cf7118a7] UUIDs [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/UUIDs`] [4ec0a83e] Unicode [`/opt/julia-0.7.0/bin/../share/julia/stdlib/v0.7/Unicode`] ----------STDERR---------- ┌ Warning: Package AsyPlots does not have DelimitedFiles in its dependencies: │ - If you have AsyPlots checked out for development and have │ added DelimitedFiles as a dependency but haven't updated your primary │ environment's manifest file, try `Pkg.resolve()`. │ - Otherwise you may need to report an issue with AsyPlots └ Loading DelimitedFiles into AsyPlots from project dependency, future warnings for AsyPlots are suppressed. ┌ Warning: Package FractionalGaussianFields does not have DataStructures in its dependencies: │ - If you have FractionalGaussianFields checked out for development and have │ added DataStructures as a dependency but haven't updated your primary │ environment's manifest file, try `Pkg.resolve()`. │ - Otherwise you may need to report an issue with FractionalGaussianFields └ Loading DataStructures into FractionalGaussianFields from project dependency, future warnings for FractionalGaussianFields are suppressed. ┌ Warning: Package AsyPlots does not have DelimitedFiles in its dependencies: │ - If you have AsyPlots checked out for development and have │ added DelimitedFiles as a dependency but haven't updated your primary │ environment's manifest file, try `Pkg.resolve()`. │ - Otherwise you may need to report an issue with AsyPlots └ Loading DelimitedFiles into AsyPlots from project dependency, future warnings for AsyPlots are suppressed. WARNING: Base.Test is deprecated, run `using Test` instead likely near /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:2 WARNING: Base.Random is deprecated, run `using Random` instead likely near /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:6 WARNING: Base.Random is deprecated, run `using Random` instead likely near /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:6 WARNING: importing deprecated binding DFT.ifft into FractionalGaussianFields. WARNING: Base.Random is deprecated, run `using Random` instead likely near /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:6 in torus_gff at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/src/FractionalGaussianFields.jl WARNING: Base.Random is deprecated, run `using Random` instead likely near /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:6 in torus_gff at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/src/FractionalGaussianFields.jl ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for FractionalGaussianFields [12b1f071-75ca-5403-9634-55c067809894] │ exception = Required dependency AsyPlots [77e5a97a-5ef9-58df-9d21-21957d92d960] failed to load from a cache file. └ @ Base loading.jl:963 ┌ Warning: Package FractionalGaussianFields does not have DataStructures in its dependencies: │ - If you have FractionalGaussianFields checked out for development and have │ added DataStructures as a dependency but haven't updated your primary │ environment's manifest file, try `Pkg.resolve()`. │ - Otherwise you may need to report an issue with FractionalGaussianFields └ Loading DataStructures into FractionalGaussianFields from project dependency, future warnings for FractionalGaussianFields are suppressed. ERROR: LoadError: ifft has been moved to the package FFTW.jl. Run `Pkg.add("FFTW")` to install it, restart Julia, and then run `using FFTW` to load it. Stacktrace: [1] error(::String) at ./error.jl:33 [2] #ifft#11(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Array{Complex{Float64},2}) at ./deprecated.jl:150 [3] ifft(::Array{Complex{Float64},2}) at ./deprecated.jl:150 [4] torus_fgf(::Int64, ::Int64, ::Int64, ::Random.MersenneTwister) at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/src/FractionalGaussianFields.jl:52 [5] torus_gff(::Int64, ::Int64, ::Random.MersenneTwister) at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/src/FractionalGaussianFields.jl:57 (repeats 2 times) [6] torus_gff(::Int64, ::Random.MersenneTwister) at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/src/FractionalGaussianFields.jl:60 (repeats 2 times) [7] top-level scope at none:0 [8] include at ./boot.jl:317 [inlined] [9] include_relative(::Module, ::String) at ./loading.jl:1038 [10] include(::Module, ::String) at ./sysimg.jl:29 [11] include(::String) at ./client.jl:398 [12] top-level scope at none:0 in expression starting at /home/jrun/FractionalGaussianFields/.julia/packages/FractionalGaussianFields/sD4VB/test/runtests.jl:6 ERROR: Package FractionalGaussianFields errored during testing Stacktrace: [1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/Types.jl:120 [2] macro expansion at ./logging.jl:313 [inlined] [3] #test#61(::Bool, ::Function, ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/Operations.jl:1283 [4] #test at ./none:0 [inlined] [5] #test#44(::Bool, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/API.jl:256 [6] #test at ./none:0 [inlined] [7] #test#43 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/API.jl:239 [inlined] [8] #test at ./none:0 [inlined] [9] #test#42(::Base.Iterators.Pairs{Symbol,Bool,Tuple{Symbol},NamedTuple{(:coverage,),Tuple{Bool}}}, ::Function, ::Array{String,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/API.jl:238 [10] #test at ./none:0 [inlined] [11] #test#41 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v0.7/Pkg/src/API.jl:237 [inlined] [12] (::getfield(Pkg.API, Symbol("#kw##test")))(::NamedTuple{(:coverage,),Tuple{Bool}}, ::typeof(Pkg.API.test), ::String) at ./none:0 [13] top-level scope at none:0