----------Julia and Package versions---------- Julia Version 1.0.0 Commit 5d4eaca0c9 (2018-08-08 20:58 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-6.0.0 (ORCJIT, haswell) Status `~/.julia/environments/v1.0/Project.toml` [9b64898b] PtFEM v1.0.0 ----------STDOUT---------- Get:1 http://cran.rstudio.com/bin/linux/ubuntu xenial/ InRelease [3590 B] Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] Get:3 http://cran.rstudio.com/bin/linux/ubuntu xenial/ Packages [134 kB] Hit:4 http://archive.ubuntu.com/ubuntu xenial InRelease Hit:5 http://ppa.launchpad.net/openjdk-r/ppa/ubuntu xenial InRelease Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [93.8 kB] Get:7 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [709 kB] Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [481 kB] Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3744 B] Get:11 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [280 kB] Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1097 kB] Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [889 kB] Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] Get:16 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8256 B] Fetched 4042 kB in 1s (3534 kB/s) Reading package lists... Cloning default registries into /home/jrun/PtFEM/.julia/registries Cloning registry General from "https://github.com/JuliaRegistries/General.git" [?25l Fetching: [> ] 0.0 % [?25h Updating registry at `~/.julia/registries/General` Updating git-repo `https://github.com/JuliaRegistries/General.git` [?25l[?25h Resolving package versions... Installed TableTraits ───────────────── v0.3.1 Installed DataStructures ────────────── v0.14.0 Installed BinaryProvider ────────────── v0.5.0 Installed FixedPointNumbers ─────────── v0.5.3 Installed DocStringExtensions ───────── v0.5.0 Installed DataStreams ───────────────── v0.4.1 Installed Colors ────────────────────── v0.9.4 Installed PtFEM ─────────────────────── v1.0.0 Installed Ratios ────────────────────── v0.3.0 Installed AxisAlgorithms ────────────── v0.3.0 Installed CodecZlib ─────────────────── v0.5.0 Installed Requires ──────────────────── v0.5.2 Installed CategoricalArrays ─────────── v0.4.0 Installed NaNMath ───────────────────── v0.3.2 Installed JSON ──────────────────────── v0.19.0 Installed WeakRefStrings ────────────── v0.5.3 Installed Showoff ───────────────────── v0.2.1 Installed Interpolations ────────────── v0.9.2 Installed Plots ─────────────────────── v0.20.4 Installed Missings ──────────────────── v0.3.1 Installed RecipesBase ───────────────── v0.6.0 Installed Compat ────────────────────── v1.2.0 Installed DataFrames ────────────────── v0.14.0 Installed Tables ────────────────────── v0.1.8 Installed Documenter ────────────────── v0.19.6 Installed OffsetArrays ──────────────── v0.8.1 Installed PlotUtils ─────────────────── v0.5.4 Installed Measures ──────────────────── v0.3.0 Installed IteratorInterfaceExtensions ─ v0.1.1 Installed Reexport ──────────────────── v0.2.0 Installed CustomUnitRanges ──────────── v0.2.0 Installed SortingAlgorithms ─────────── v0.3.1 Installed ColorTypes ────────────────── v0.7.5 Installed WoodburyMatrices ──────────── v0.4.1 Installed QuadGK ────────────────────── v2.0.2 Installed TranscodingStreams ────────── v0.8.1 Installed PlotThemes ────────────────── v0.3.0 Installed StatsBase ─────────────────── v0.25.0 Installed Contour ───────────────────── v0.5.1 Installed GR ────────────────────────── v0.34.1 Installed StaticArrays ──────────────── v0.8.3 Installed OrderedCollections ────────── v1.0.2 Updating `~/.julia/environments/v1.0/Project.toml` [9b64898b] + PtFEM v1.0.0 Updating `~/.julia/environments/v1.0/Manifest.toml` [13072b0f] + AxisAlgorithms v0.3.0 [b99e7846] + BinaryProvider v0.5.0 [324d7699] + CategoricalArrays v0.4.0 [944b1d66] + CodecZlib v0.5.0 [3da002f7] + ColorTypes v0.7.5 [5ae59095] + Colors v0.9.4 [34da2185] + Compat v1.2.0 [d38c429a] + Contour v0.5.1 [dc8bdbbb] + CustomUnitRanges v0.2.0 [a93c6f00] + DataFrames v0.14.0 [9a8bc11e] + DataStreams v0.4.1 [864edb3b] + DataStructures v0.14.0 [ffbed154] + DocStringExtensions v0.5.0 [e30172f5] + Documenter v0.19.6 [53c48c17] + FixedPointNumbers v0.5.3 [28b8d3ca] + GR v0.34.1 [a98d9a8b] + Interpolations v0.9.2 [82899510] + IteratorInterfaceExtensions v0.1.1 [682c06a0] + JSON v0.19.0 [442fdcdd] + Measures v0.3.0 [e1d29d7a] + Missings v0.3.1 [77ba4419] + NaNMath v0.3.2 [6fe1bfb0] + OffsetArrays v0.8.1 [bac558e1] + OrderedCollections v1.0.2 [ccf2f8ad] + PlotThemes v0.3.0 [995b91a9] + PlotUtils v0.5.4 [91a5bcdd] + Plots v0.20.4 [9b64898b] + PtFEM v1.0.0 [1fd47b50] + QuadGK v2.0.2 [c84ed2f1] + Ratios v0.3.0 [3cdcf5f2] + RecipesBase v0.6.0 [189a3867] + Reexport v0.2.0 [ae029012] + Requires v0.5.2 [992d4aef] + Showoff v0.2.1 [a2af1166] + SortingAlgorithms v0.3.1 [90137ffa] + StaticArrays v0.8.3 [2913bbd2] + StatsBase v0.25.0 [3783bdb8] + TableTraits v0.3.1 [bd369af6] + Tables v0.1.8 [3bb67fe8] + TranscodingStreams v0.8.1 [ea10d353] + WeakRefStrings v0.5.3 [efce3f68] + WoodburyMatrices v0.4.1 [2a0f44e3] + Base64 [ade2ca70] + Dates [8bb1440f] + DelimitedFiles [8ba89e20] + Distributed [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [44cfe95a] + Pkg [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays [10745b16] + Statistics [4607b0f0] + SuiteSparse [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode Building CodecZlib → `~/.julia/packages/CodecZlib/wwgbh/deps/build.log` Building GR ───────→ `~/.julia/packages/GR/joQgG/deps/build.log` Building Plots ────→ `~/.julia/packages/Plots/UtVfv/deps/build.log` Running PtFEM/PtFEM.jl tests: * p41.1.jl * There are 4 equations. 4.942114 seconds (8.92 M allocations: 440.572 MiB, 5.61% gc time) Testing: round.(m.displacements, digits=8) == [-2.5e-5 -2.344e-5 -1.875e-5 -1.094e-5 0.0]' * p41.2.jl * There are 4 equations. 0.066282 seconds (38.90 k allocations: 2.215 MiB) Testing: round.(fem.displacements, digits=7) == [0.0 0.0166667 0.0333333 0.0416667 0.05]' * p42.2.jl * There are 10 equations. 1.205563 seconds (1.85 M allocations: 89.788 MiB, 3.28% gc time) * p43.1b.jl * There are 3 equations. 1.242474 seconds (1.96 M allocations: 97.601 MiB, 4.14% gc time) * p44.2.jl * There are 12 equations. 1.419855 seconds (2.06 M allocations: 101.975 MiB, 3.93% gc time) * p45.2.jl * There are 36 equations. Load step: 1, load factor: 0.5 ... Node Displacement(s) and Rotation(s) (Iterations: 3) 7 [0.0, 0.0, 0.00010588, -6.34521e-5, -6.34521e-5, 0.0] Load step: 2, load factor: 1.0 ... Node Displacement(s) and Rotation(s) (Iterations: 3) 7 [0.0, 0.0, 0.000211735, -0.000126885, -0.000126885, 0.0] Load step: 3, load factor: 1.5 .................. Node Displacement(s) and Rotation(s) (Iterations: 18) 7 [0.0, 0.0, 0.000324728, -0.000193577, -0.000193577, 0.0] Load step: 4, load factor: 1.55 ........................................................................................................................................................................................................ Node Displacement(s) and Rotation(s) (Iterations: 200) 7 [0.0, 0.0, 0.00151004, -0.000790624, -0.000790624, 0.0] 1.779671 seconds (2.69 M allocations: 155.147 MiB, 8.50% gc time) * p46.2.jl * There are 7 equations. 0.671174 seconds (1.00 M allocations: 48.837 MiB, 3.49% gc time) * p47.1.jl * There are 16 equations. 2.233089 seconds (3.79 M allocations: 180.016 MiB, 3.48% gc time) * p51.1.jl * There are 12 equations. 3.052406 seconds (4.97 M allocations: 239.090 MiB, 3.68% gc time) * p51.2.jl * There are 64 equations. 0.018016 seconds (14.49 k allocations: 2.700 MiB) * p51.3.jl * There are 12 equations. 0.053141 seconds (40.02 k allocations: 2.147 MiB) * p51.4.jl * There are 36 equations. 0.001137 seconds (1.62 k allocations: 461.969 KiB) * p51.5.jl * There are 12 equations. 0.097925 seconds (149.65 k allocations: 7.659 MiB) * p52.1.jl * There are 65 equations. 1.010152 seconds (1.12 M allocations: 54.000 MiB, 2.10% gc time) * p53.1.jl * There are 124 equations. 1.586564 seconds (2.49 M allocations: 119.011 MiB, 4.16% gc time) * p54.1.jl * There are 48 equations. Element x-coord y-coord sig_x sig_y tau_xy 1.349283 seconds (1.97 M allocations: 95.875 MiB, 10.19% gc time) * p54.2.jl * There are 12 equations. 0.254760 seconds (431.65 k allocations: 22.202 MiB, 3.30% gc time) * p55.1.jl * There are 320 equations. 1.267482 seconds (1.70 M allocations: 87.302 MiB, 2.93% gc time) * p56.1.jl * There are 124 equations. .[cg_iters beta] = [1.0 0.630834] .[cg_iters beta] = [2.0 0.553478] .[cg_iters beta] = [3.0 0.847296] .[cg_iters beta] = [4.0 1.7979] .[cg_iters beta] = [5.0 1.08013] .[cg_iters beta] = [6.0 1.19829] .[cg_iters beta] = [7.0 0.546302] .[cg_iters beta] = [8.0 0.668109] .[cg_iters beta] = [9.0 0.69812] .[cg_iters beta] = [10.0 0.868474] .[cg_iters beta] = [11.0 0.858824] .[cg_iters beta] = [12.0 0.824099] .[cg_iters beta] = [13.0 0.510176] .[cg_iters beta] = [14.0 0.487356] .[cg_iters beta] = [15.0 0.49746] .[cg_iters beta] = [16.0 0.667716] .[cg_iters beta] = [17.0 0.989044] .[cg_iters beta] = [18.0 1.03705] .[cg_iters beta] = [19.0 0.8586] .[cg_iters beta] = [20.0 0.649938] .[cg_iters beta] = [21.0 0.643714] .[cg_iters beta] = [22.0 0.541638] .[cg_iters beta] = [23.0 0.674208] .[cg_iters beta] = [24.0 0.818067] .[cg_iters beta] = [25.0 0.644494] .[cg_iters beta] = [26.0 0.570565] .[cg_iters beta] = [27.0 0.884093] .[cg_iters beta] = [28.0 0.512502] .[cg_iters beta] = [29.0 0.995298] .[cg_iters beta] = [30.0 0.545703] .[cg_iters beta] = [31.0 0.608283] .[cg_iters beta] = [32.0 0.994603] .[cg_iters beta] = [33.0 1.08018] .[cg_iters beta] = [34.0 0.55451] .[cg_iters beta] = [35.0 0.594974] .[cg_iters beta] = [36.0 1.34126] .[cg_iters beta] = [37.0 0.800376] .[cg_iters beta] = [38.0 1.89712] .[cg_iters beta] = [39.0 0.327079] .[cg_iters beta] = [40.0 0.785072] .[cg_iters beta] = [41.0 0.656464] .[cg_iters beta] = [42.0 0.817868] .[cg_iters beta] = [43.0 1.64438] .[cg_iters beta] = [44.0 0.336734] .[cg_iters beta] = [45.0 0.638198] .[cg_iters beta] = [46.0 0.754489] .[cg_iters beta] = [47.0 1.47347] .[cg_iters beta] = [48.0 0.341182] .[cg_iters beta] = [49.0 1.405] .[cg_iters beta] = [50.0 0.557991] .[cg_iters beta] = [51.0 0.384309] .[cg_iters beta] = [52.0 0.548694] .[cg_iters beta] = [53.0 0.467239] .[cg_iters beta] = [54.0 0.827832] .[cg_iters beta] = [55.0 1.28841] .[cg_iters beta] = [56.0 0.571041] .[cg_iters beta] = [57.0 0.531059] .[cg_iters beta] = [58.0 0.71214] .[cg_iters beta] = [59.0 1.2855] .[cg_iters beta] = [60.0 0.44942] .[cg_iters beta] = [61.0 1.6454] .[cg_iters beta] = [62.0 0.325932] .[cg_iters beta] = [63.0 0.44879] .[cg_iters beta] = [64.0 0.65794] .[cg_iters beta] = [65.0 1.90289] .[cg_iters beta] = [66.0 0.380828] .[cg_iters beta] = [67.0 1.05344] .[cg_iters beta] = [68.0 0.361132] .[cg_iters beta] = [69.0 0.752991] .[cg_iters beta] = [70.0 0.414046] .[cg_iters beta] = [71.0 0.515218] .[cg_iters beta] = [72.0 0.588494] .[cg_iters beta] = [73.0 1.17064] Number of cg iterations to convergence was 73. 2.644939 seconds (4.08 M allocations: 215.245 MiB, 4.26% gc time) * p61.1.jl * There are 192 equations and the skyline storage is 4322. step load disp iters 1 200.0 -6.5927e-03 2 2 300.0 -1.1550e-02 11 3 350.0 -1.6303e-02 20 4 400.0 -2.3172e-02 33 5 450.0 -3.3212e-02 45 6 480.0 -4.2355e-02 66 7 500.0 -5.0957e-02 82 8 510.0 -5.6793e-02 100 9 515.0 -6.1090e-02 160 10 519.0 -7.1349e-02 250 4.115503 seconds (11.93 M allocations: 752.122 MiB, 8.25% gc time) * p62.1.jl * There are 192 equations. 1 200.0 -6.5925e-03 2 50.0 2 300.0 -1.1549e-02 11 51.82 3 350.0 -1.6301e-02 20 53.7 4 400.0 -2.3169e-02 33 54.55 5 450.0 -3.3211e-02 45 54.73 6 480.0 -4.2357e-02 66 54.8 7 500.0 -5.0967e-02 82 54.8 8 510.0 -5.6800e-02 100 54.82 9 515.0 -6.1014e-02 152 54.62 10 519.0 -7.1163e-02 250 55.66 8.573253 seconds (37.65 M allocations: 6.233 GiB, 11.01% gc time) * p63.1.jl * There are 4800 equations. step disp load1 load2 iters 1 0.001 57.33294 54.9679 11 2 0.002 85.0191 82.48724 22 3 0.003 111.23223 108.43396 25 4 0.004 136.62429 133.63711 27 5 0.005 161.27425 158.0585 30 6 0.006 185.25765 181.76863 33 7 0.007 208.59404 204.79971 36 8 0.008 231.31382 227.17024 40 9 0.009 253.25585 248.98587 57 10 0.01 274.35146 270.01839 81 14.939145 seconds (60.42 M allocations: 4.580 GiB, 7.85% gc time) Test Summary: | Pass Total PtFEM.jl | 24 24 Testing PtFEM Resolving package versions... Status `/tmp/tmpXn8mJ4/Manifest.toml` [13072b0f] AxisAlgorithms v0.3.0 [b99e7846] BinaryProvider v0.5.0 [324d7699] CategoricalArrays v0.4.0 [944b1d66] CodecZlib v0.5.0 [3da002f7] ColorTypes v0.7.5 [5ae59095] Colors v0.9.4 [34da2185] Compat v1.2.0 [d38c429a] Contour v0.5.1 [dc8bdbbb] CustomUnitRanges v0.2.0 [a93c6f00] DataFrames v0.14.0 [9a8bc11e] DataStreams v0.4.1 [864edb3b] DataStructures v0.14.0 [ffbed154] DocStringExtensions v0.5.0 [e30172f5] Documenter v0.19.6 [53c48c17] FixedPointNumbers v0.5.3 [28b8d3ca] GR v0.34.1 [a98d9a8b] Interpolations v0.9.2 [82899510] IteratorInterfaceExtensions v0.1.1 [682c06a0] JSON v0.19.0 [442fdcdd] Measures v0.3.0 [e1d29d7a] Missings v0.3.1 [77ba4419] NaNMath v0.3.2 [6fe1bfb0] OffsetArrays v0.8.1 [bac558e1] OrderedCollections v1.0.2 [ccf2f8ad] PlotThemes v0.3.0 [995b91a9] PlotUtils v0.5.4 [91a5bcdd] Plots v0.20.4 [9b64898b] PtFEM v1.0.0 [1fd47b50] QuadGK v2.0.2 [c84ed2f1] Ratios v0.3.0 [3cdcf5f2] RecipesBase v0.6.0 [189a3867] Reexport v0.2.0 [ae029012] Requires v0.5.2 [992d4aef] Showoff v0.2.1 [a2af1166] SortingAlgorithms v0.3.1 [90137ffa] StaticArrays v0.8.3 [2913bbd2] StatsBase v0.25.0 [3783bdb8] TableTraits v0.3.1 [bd369af6] Tables v0.1.8 [3bb67fe8] TranscodingStreams v0.8.1 [ea10d353] WeakRefStrings v0.5.3 [efce3f68] WoodburyMatrices v0.4.1 [2a0f44e3] Base64 [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Base64`] [ade2ca70] Dates [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Dates`] [8bb1440f] DelimitedFiles [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/DelimitedFiles`] [8ba89e20] Distributed [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Distributed`] [9fa8497b] Future [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Future`] [b77e0a4c] InteractiveUtils [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/InteractiveUtils`] [76f85450] LibGit2 [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/LibGit2`] [8f399da3] Libdl [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Libdl`] [37e2e46d] LinearAlgebra [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/LinearAlgebra`] [56ddb016] Logging [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Logging`] [d6f4376e] Markdown [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Markdown`] [a63ad114] Mmap [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Mmap`] [44cfe95a] Pkg [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Pkg`] [de0858da] Printf [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Printf`] [3fa0cd96] REPL [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/REPL`] [9a3f8284] Random [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Random`] [ea8e919c] SHA [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/SHA`] [9e88b42a] Serialization [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Serialization`] [1a1011a3] SharedArrays [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/SharedArrays`] [6462fe0b] Sockets [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Sockets`] [2f01184e] SparseArrays [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/SparseArrays`] [10745b16] Statistics [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Statistics`] [4607b0f0] SuiteSparse [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/SuiteSparse`] [8dfed614] Test [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Test`] [cf7118a7] UUIDs [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/UUIDs`] [4ec0a83e] Unicode [`/opt/julia-1.0.0/bin/../share/julia/stdlib/v1.0/Unicode`] Testing PtFEM tests passed ----------STDERR----------